Can I upload data from other technologies to Trailmaker?

The Pipeline module is specifically designed to support the processing of Parse Biosciences’ Evercode™ FASTQ files. It is not possible to process FASTQ files generated using other technologies using the Pipeline module in Trailmaker™.

However, the Insights module of Trailmaker supports the downstream analysis and visualization of multiple technologies including Parse Biosciences' Evercode WT, 10x Chromium™ and BD Rhapsody™. In addition to supporting count matrices from several technologies, Trailmaker Insights module also supports the upload of Seurat objects as well as H5 files that are output from Cell Ranger™. For explanation of the specific requirements for each data type, please navigate to the "Uploading your own data" section of the user guide.