Parse Biosciences Experimental Report

Sample: all-well Wells: A1-D12

Estimated Number of Cells	100,626
hg38 Number of Cells Detected	48,555
mm10 Number of Cells Detected	50,343
multiplet Number of Cells Detected	1,728
hg38 Median Transcripts/Cell	8,417
mm10 Median Transcripts/Cell	6,155
hg38 Median Genes/Cell	4,005
mm10 Median Genes/Cell	2,873
Mean Reads/Cell	22,219
Number of Reads	2,153,442,109
Sequencing Saturation	0.153
BC1 (RT) >Q30	0.852
BC2 >Q30	0.874
BC3 >Q30	0.888
cDNA >Q30	0.880

Differentially Expressed Genes

Cluster	Gene name	Score	Pval adj	Log FC
0	Mxd4_mm10	14.8	2.8e-50	2.2
0	Trp53inp1_mm10	8.5	2.9e-190	1.8
0	Tmem150a_mm10	8.1	5.4e-15	1.6
0	Nr4a3_mm10	7.7	1.7e-09	1.9
0	Dhrs3_mm10	7.6	1.4e-14	1.6
0	Trp53inp2_mm10	7.5	2.1e-33	1.7
0	Fbxo32_mm10	7.1	3.1e-15	1.6
0	Lmod1_mm10	7.0	1.7e-09	1.8
0	Fst_mm10	6.9	1.4e-18	1.6
0	Pappa_mm10	6.9	0.0e+00	1.8
0	Gm14280_mm10	6.9	8.8e-15	1.7
0	Aox1_mm10	6.8	1.0e-121	1.6
0	Kdm7a_mm10	6.8	0.0e+00	1.6
0	Dcn_mm10	6.7	2.2e-09	1.6
0	Sema4g_mm10	6.4	5.2e-37	1.5
0	Ypel3_mm10	6.3	2.3e-11	1.4
0	Igfbp4_mm10	6.2	9.1e-07	1.8
0	Rasl11b_mm10	6.2	1.8e-09	1.5
0	BC022687_mm10	6.1	1.5e-14	1.4
0	Nckap5l_mm10	6.0	5.8e-214	1.5
1	AL157778.1_hg38	35.0	4.5e-114	4.7
1	LINC02505_hg38	30.9	6.7e-67	4.3
1	KHDRBS2_hg38	30.1	0.0e+00	4.4
1	OFCC1_hg38	29.7	1.1e-51	4.1
1	NXPH2_hg38	29.1	1.5e-31	4.1
1	AC019183.1_hg38	27.1	0.0e+00	4.2
1	SCN2A_hg38	26.0	1.0e-262	4.2
1	AC005394.1_hg38	22.9	0.0e+00	4.2
1	FUT9_hg38	22.9	1.1e-99	4.0
1	HCN1_hg38	22.7	5.5e-19	4.0
1	PCDH11X_hg38	22.3	3.4e-75	4.0
1	AC092691.1_hg38	22.1	1.7e-200	3.9
1	AGMO_hg38	22.0	2.5e-150	4.0
1	LINC00871_hg38	21.8	8.9e-208	4.0
1	AC005524.1_hg38	21.7	0.0e+00	4.0
1	AC008109.1_hg38	21.5	0.0e+00	3.9
1	AC019197.1_hg38	20.9	0.0e+00	4.0
1	AC073365.1_hg38	20.6	1.2e-104	3.9
1	MARCH1_hg38	20.5	1.2e-242	4.0
1	AL035401.1_hg38	19.9	0.0e+00	4.1
2	Cdc6_mm10	56.6	0.0e+00	3.5
2	Ccne2_mm10	43.7	0.0e+00	3.3
2	Dscc1_mm10	37.5	4.3e-102	3.0
2	Tcf19_mm10	28.9	7.2e-191	2.8
2	Ung_mm10	25.5	8.0e-55	2.8
2	Mybl2_mm10	22.7	0.0e+00	2.7
2	E2f2_mm10	22.0	8.3e-74	2.5
2	Dhfr_mm10	21.1	0.0e+00	2.6
2	Chaf1b_mm10	20.9	0.0e+00	2.5
2	Cdc45_mm10	18.6	0.0e+00	2.5
2	Rmi2_mm10	18.6	0.0e+00	2.5
2	Dna2_mm10	17.8	0.0e+00	2.4
2	Wdr76_mm10	17.1	0.0e+00	2.4
2	Slfn9_mm10	16.2	0.0e+00	2.5
2	Prim1_mm10	16.0	0.0e+00	2.3
2	Rad51ap1_mm10	15.1	0.0e+00	2.3
2	Brip1_mm10	14.9	0.0e+00	2.4
2	Cenpu_mm10	14.8	0.0e+00	2.3
2	Wdhd1_mm10	13.9	0.0e+00	2.2
2	Rad54l_mm10	13.7	0.0e+00	2.2
3	Pif1_mm10	139.5	0.0e+00	4.4
3	Fam83d_mm10	84.8	0.0e+00	3.6
3	Ccnb1_mm10	73.6	0.0e+00	3.6
3	Plk1_mm10	70.1	0.0e+00	3.6
3	Nusap1_mm10	69.6	0.0e+00	3.8
3	Ube2c_mm10	69.5	0.0e+00	3.7
3	Cdkn3_mm10	59.9	0.0e+00	3.2
3	Aurka_mm10	56.2	0.0e+00	3.4
3	Cdc25c_mm10	55.4	0.0e+00	3.3
3	Cenpa_mm10	50.6	0.0e+00	3.6
3	Gas2l3_mm10	48.1	0.0e+00	3.3
3	Depdc1b_mm10	47.6	0.0e+00	3.2
3	Kif2c_mm10	46.6	0.0e+00	3.3
3	Kif18b_mm10	46.1	0.0e+00	3.2
3	Arhgap19_mm10	45.3	0.0e+00	3.1
3	Depdc1a_mm10	42.3	0.0e+00	3.1
3	Kif14_mm10	40.9	0.0e+00	3.2
3	Hmmr_mm10	40.6	0.0e+00	3.4
3	Prr11_mm10	40.3	0.0e+00	3.1
3	Troap_mm10	38.7	0.0e+00	3.1
4	AURKA_hg38	42.3	0.0e+00	4.7
4	CCNB1_hg38	32.3	0.0e+00	4.4
4	HMMR_hg38	27.7	0.0e+00	4.3
4	GAS2L3_hg38	24.3	0.0e+00	4.2
4	KPNA2_hg38	22.7	0.0e+00	4.1
4	CDCA2_hg38	22.0	0.0e+00	4.0
4	KIF23_hg38	21.7	0.0e+00	4.1
4	KIF2C_hg38	21.4	0.0e+00	3.9
4	NDC80_hg38	20.0	0.0e+00	3.8
4	CEP70_hg38	18.4	0.0e+00	3.8
4	KIF4A_hg38	17.4	0.0e+00	4.0
4	GPSM2_hg38	17.0	0.0e+00	3.7
4	TTK_hg38	16.8	0.0e+00	3.7
4	SOX2-OT_hg38	16.7	5.7e-125	3.3
4	KIF14_hg38	16.6	0.0e+00	3.9
4	TPX2_hg38	16.5	0.0e+00	3.9
4	BORA_hg38	16.1	0.0e+00	3.6
4	POT1-AS1_hg38	15.8	1.8e-123	3.2
4	ARL6IP1_hg38	15.2	0.0e+00	3.6
4	CFAP161_hg38	15.2	1.3e-09	3.2
5	LINC01194_hg38	37.3	5.5e-19	4.9
5	AC015522.1_hg38	36.5	2.2e-12	6.0
5	LINC01446_hg38	34.6	1.1e-15	5.0
5	KCNJ6_hg38	22.6	3.8e-08	4.0
5	SHANK2_hg38	19.4	4.7e-46	4.0
5	GABRA3_hg38	19.1	5.6e-10	3.9
5	C22orf34_hg38	15.4	9.2e-03	4.4
5	CA2_hg38	14.9	3.3e-63	4.3
5	DLGAP2_hg38	14.2	3.4e-04	3.7
5	NKAIN1_hg38	13.7	2.9e-33	3.8
5	LINC00351_hg38	12.7	6.9e-02	3.7
5	LINC00470_hg38	11.9	1.7e-71	3.6
5	AC109927.1_hg38	11.5	1.6e-07	3.5
5	ANGPT1_hg38	10.7	5.9e-02	3.4
5	AC069277.1_hg38	10.7	2.7e-27	3.6
5	NEFM_hg38	10.1	7.4e-14	4.4
5	ADAMTS5_hg38	10.0	4.0e-02	4.2
5	ASNSP1_hg38	9.4	1.3e-76	3.4
5	TWIST2_hg38	9.3	1.6e-15	3.3
5	LINC00958_hg38	8.9	8.2e-05	3.2
6	AC079779.2_hg38	41.7	2.1e-21	5.1
6	IDI2-AS1_hg38	38.0	1.1e-30	5.1
6	STPG4_hg38	35.8	5.9e-12	5.9
6	ADCY10_hg38	34.3	3.1e-14	5.0
6	CMYA5_hg38	26.8	7.4e-19	4.6
6	NUP210L_hg38	25.4	9.3e-13	4.5
6	AC097460.1_hg38	24.3	2.6e-07	4.6
6	MSH4_hg38	21.1	4.7e-57	4.6
6	C9orf153_hg38	20.9	2.6e-51	4.4
6	WDR78_hg38	19.3	4.8e-113	4.4
6	AL136531.2_hg38	17.8	1.3e-117	4.4
6	AC104170.1_hg38	16.5	1.1e-26	4.2
6	BAALC-AS1_hg38	16.4	2.1e-115	4.4
6	LINC00862_hg38	16.2	3.5e-121	4.4
6	AC105094.2_hg38	16.1	9.0e-07	3.9
6	UNC79_hg38	15.8	1.1e-18	4.1
6	SNHG5_hg38	14.1	0.0e+00	4.2
6	DRAIC_hg38	13.9	5.2e-19	4.2
6	AP002026.1_hg38	13.3	3.1e-41	3.9
6	LRRC23_hg38	13.3	1.5e-41	4.1
7	FAM155A_hg38	80.4	0.0e+00	5.7
7	PLD5_hg38	75.2	0.0e+00	5.5
7	PDE1C_hg38	53.4	1.2e-60	4.8
7	ARHGAP6_hg38	49.1	4.6e-29	5.0
7	SLCO3A1_hg38	48.9	0.0e+00	4.8
7	KCND3_hg38	44.4	1.4e-61	4.6
7	LDB2_hg38	43.2	1.4e-23	4.9
7	GABRB3_hg38	39.8	2.0e-22	4.6
7	SLC35F3_hg38	38.8	0.0e+00	4.8
7	GRM8_hg38	37.6	1.5e-293	4.6
7	NELL1_hg38	31.7	0.0e+00	4.6
7	NWD2_hg38	31.2	4.4e-52	4.3
7	NRG1_hg38	28.5	2.8e-19	3.7
7	FGF13_hg38	27.3	0.0e+00	4.4
7	NRG3_hg38	27.2	0.0e+00	4.7
7	CDH4_hg38	26.8	6.1e-23	4.1
7	Z93403.1_hg38	25.7	1.3e-11	3.9
7	AC128689.1_hg38	24.7	0.0e+00	4.1
7	TWIST2_hg38	24.4	1.1e-85	3.8
7	RGS6_hg38	23.9	9.2e-21	4.0
8	Auts2_mm10	270.7	0.0e+00	5.2
8	Pcdh9_mm10	262.1	0.0e+00	5.7
8	Slc6a15_mm10	128.2	5.1e-132	4.6
8	Cacnb2_mm10	91.0	2.1e-86	4.0
8	Sfmbt1_mm10	25.7	3.0e-110	2.7
8	Ercc6l2_mm10	22.4	8.7e-20	2.4
8	Adgrl3_mm10	17.2	0.0e+00	3.0
8	Lpl_mm10	15.6	3.1e-22	2.1
8	Tnnt2_mm10	12.4	5.7e-16	1.9
8	Gm16263_mm10	11.9	3.7e-04	1.9
8	Gpat3_mm10	11.4	6.8e-17	1.9
8	Fam19a1_mm10	11.0	6.2e-13	2.0
8	Inpp4b_mm10	10.6	4.3e-13	1.8
8	Vegfc_mm10	10.4	4.3e-07	1.8
8	Dbt_mm10	9.6	4.6e-11	1.7
8	Glt8d2_mm10	9.6	1.9e-02	1.8
8	Ripor2_mm10	9.4	2.5e-116	1.9
8	Cacna1i_mm10	9.2	1.4e-02	1.7
8	Ralgps2_mm10	9.1	2.9e-35	1.7
8	Magi2_mm10	9.0	7.1e-48	1.8
9	Msh4_mm10	45.2	2.1e-28	3.7
9	Gm15892_mm10	43.8	1.7e-21	3.6
9	Pygm_mm10	36.7	4.3e-15	3.5
9	C130036L24Rik_mm10	33.0	5.5e-14	3.3
9	AC139347.1_mm10	25.4	2.5e-14	3.0
9	Stpg4_mm10	24.1	6.5e-06	3.5
9	Avil_mm10	22.7	1.5e-40	2.9
9	Ovgp1_mm10	21.6	6.8e-34	2.8
9	Gzmm_mm10	20.6	5.1e-22	2.7
9	Col11a2_mm10	19.9	5.7e-07	2.7
9	Ubap1l_mm10	19.4	9.9e-05	3.0
9	Gm16153_mm10	17.2	3.4e-05	2.5
9	Rhof_mm10	15.0	1.3e-05	2.4
9	Lsmem1_mm10	13.5	7.6e-05	2.4
9	Nup210l_mm10	13.3	3.9e-67	2.4
9	Rrh_mm10	12.1	3.2e-02	2.3
9	Lat2_mm10	11.9	1.5e-05	2.1
9	Clcn1_mm10	11.4	4.4e-11	2.2
9	Prkcg_mm10	11.4	4.2e-253	2.4
9	Grik5_mm10	10.9	1.6e-26	2.2
10	HIF1A-AS2_hg38	108.2	6.6e-287	6.3
10	STC1_hg38	71.6	2.4e-51	5.3
10	AMPD3_hg38	68.7	4.8e-31	5.3
10	PFKFB4_hg38	53.6	1.3e-203	5.3
10	LOX_hg38	38.6	3.7e-130	5.3
10	AC010655.2_hg38	32.3	7.2e-178	4.8
10	AC115622.1_hg38	28.7	6.2e-18	4.4
10	TMEM45A_hg38	26.2	9.0e-98	4.4
10	PPFIA4_hg38	23.3	0.0e+00	4.5
10	NR4A3_hg38	23.0	9.1e-09	4.1
10	DIRC3_hg38	22.2	0.0e+00	4.6
10	TNNI3K_hg38	19.8	5.8e-33	4.0
10	AL357153.2_hg38	18.3	2.4e-05	3.8
10	GBE1_hg38	18.1	0.0e+00	4.5
10	Z96074.1_hg38	17.7	5.8e-06	3.8
10	BNIP3L_hg38	17.1	1.0e-88	3.9
10	ADAMTS9-AS2_hg38	16.9	1.5e-01	3.7
10	SAT1_hg38	16.8	1.3e-21	4.1
10	ABI3BP_hg38	16.4	1.2e-35	3.9
10	AC104211.1_hg38	16.1	8.1e-06	3.7
11	RNLS_hg38	3.2	1.0e+00	1.0
11	Gm26688_mm10	2.7	1.0e+00	1.2
11	AC105094.2_hg38	2.5	1.0e+00	0.8
11	TENM2_hg38	2.5	1.0e+00	0.9
11	Z93403.1_hg38	2.5	1.0e+00	0.8
11	AP003181.1_hg38	2.5	1.0e+00	0.9
11	LINC01707_hg38	2.4	1.0e+00	0.9
11	HIF1A-AS2_hg38	2.3	1.9e-02	0.9
11	CCDC144NL-AS1_hg38	2.2	1.0e+00	0.9
11	Gm47167_mm10	2.2	1.0e+00	0.7
11	AC005699.1_hg38	2.1	1.0e+00	0.8
11	Gm42836_mm10	2.1	1.0e+00	0.9
11	AC015522.1_hg38	2.0	1.0e+00	1.0
11	Angpt2_mm10	2.0	1.0e+00	0.8
11	GRIA4_hg38	1.9	1.0e+00	0.7
11	Gm17058_mm10	1.9	1.0e+00	0.7
11	AC092167.1_hg38	1.9	1.0e+00	0.7
11	PLPPR1_hg38	1.9	1.0e+00	0.8
11	LINC01950_hg38	1.9	1.0e+00	0.9
11	MIR4300HG_hg38	1.9	1.0e+00	0.7
12	Cacnb2_mm10	249.1	6.2e-99	5.4
12	Nhsl2_mm10	180.9	1.1e-82	5.1
12	Mir99ahg_mm10	145.0	9.7e-51	4.5
12	Tshz3_mm10	96.1	8.5e-25	3.9
12	Ptpn13_mm10	95.7	2.6e-74	4.2
12	Mylk_mm10	94.6	8.4e-46	4.4
12	Mfap5_mm10	81.0	6.3e-42	3.9
12	Fbxl7_mm10	79.5	7.4e-14	4.2
12	Aspn_mm10	76.6	6.2e-12	4.4
12	Col11a1_mm10	76.4	2.8e-14	4.1
12	Dlgap2_mm10	76.4	1.2e-15	3.8
12	Pi15_mm10	70.0	3.3e-92	4.0
12	Kif26b_mm10	58.7	1.7e-29	3.6
12	Pcdh7_mm10	53.7	3.1e-288	4.5
12	Col12a1_mm10	47.0	1.4e-31	4.3
12	C1s1_mm10	46.2	6.4e-13	3.3
12	Aff3_mm10	44.7	7.1e-31	3.2
12	Adgrg6_mm10	44.2	5.0e-06	3.4
12	C1ra_mm10	35.5	3.7e-12	3.0
12	Pde7b_mm10	34.2	2.1e-03	3.3
13	Gm28438_mm10	7.8	1.0e+00	3.5
13	Gm37768_mm10	6.7	1.0e+00	3.1
13	Efcab8_mm10	6.6	1.0e+00	3.2
13	Cenpf_mm10	5.9	6.0e-03	3.2
13	Far1os_mm10	4.6	1.0e+00	3.0
13	Edaradd_mm10	4.6	1.0e+00	3.1
13	Adra1b_mm10	4.5	1.0e+00	3.0
13	KIAA0319_hg38	4.2	1.0e+00	4.4
13	ALDOA_hg38	4.2	1.0e+00	3.1
13	RPL8_hg38	4.1	1.0e+00	3.1
13	Gm46401_mm10	4.1	1.0e+00	2.8
13	Gm11884_mm10	4.0	1.0e+00	2.9
13	EEF2_hg38	4.0	1.6e-09	2.9
13	HSP90AA1_hg38	3.9	4.3e-10	3.1
13	Isg20_mm10	3.8	1.0e+00	2.6
13	HIST1H1E_hg38	3.8	1.0e+00	3.2
13	HIST1H1C_hg38	3.7	1.0e+00	3.1
13	Gm17058_mm10	3.6	1.0e+00	2.6
13	Gm19303_mm10	3.6	1.0e+00	2.3
13	H3F3B_hg38	3.6	1.0e+00	2.7